From 99fd7310629e64ac1f0b2c959fe8871e78dfb1e9 Mon Sep 17 00:00:00 2001
From: Eilert Tunheim <emtunhei@stud.ntnu.no>
Date: Wed, 27 Apr 2022 14:24:57 +0200
Subject: [PATCH] Started working on logistic regression, wrong formula

---
 Bachelor_application.iml                      |  33 +-------------
 pom.xml                                       |   6 +--
 src/main/java/com/application/DB/DB.java      |   5 ++
 .../GUI/LineChartFunctionality.java           |  43 +++++++++++++++---
 target/classes/com/application/DB/DB.class    | Bin 15680 -> 14919 bytes
 .../GUI/LineChartFunctionality.class          | Bin 9379 -> 10007 bytes
 6 files changed, 46 insertions(+), 41 deletions(-)

diff --git a/Bachelor_application.iml b/Bachelor_application.iml
index e44eb08..f8154df 100644
--- a/Bachelor_application.iml
+++ b/Bachelor_application.iml
@@ -54,37 +54,6 @@
     <orderEntry type="library" name="Maven: com.google.auto.value:auto-value-annotations:1.9" level="project" />
     <orderEntry type="library" name="Maven: org.apache.commons:commons-math3:3.6.1" level="project" />
     <orderEntry type="library" name="Maven: joda-time:joda-time:2.10.14" level="project" />
-    <orderEntry type="library" name="Maven: org.python:jython-slim:2.7.2" level="project" />
-    <orderEntry type="library" name="Maven: org.antlr:antlr:3.5.2" level="project" />
-    <orderEntry type="library" name="Maven: org.antlr:ST4:4.0.8" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: javax.servlet:javax.servlet-api:3.1.0" level="project" />
-    <orderEntry type="library" name="Maven: org.antlr:antlr-runtime:3.5.2" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: org.apache.commons:commons-compress:1.19" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: org.bouncycastle:bcpkix-jdk15on:1.62" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: org.bouncycastle:bcprov-jdk15on:1.62" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: org.ow2.asm:asm:7.1" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: org.ow2.asm:asm-commons:7.1" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: org.ow2.asm:asm-tree:7.1" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: org.ow2.asm:asm-analysis:7.1" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: org.ow2.asm:asm-util:7.1" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: com.ibm.icu:icu4j:59.1" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: com.carrotsearch:java-sizeof:0.0.5" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: com.github.jnr:jffi:1.2.20" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: com.github.jnr:jnr-netdb:1.1.6" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: com.github.jnr:jnr-ffi:2.1.10" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: com.github.jnr:jffi:native:1.2.19" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: com.github.jnr:jnr-a64asm:1.0.0" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: com.github.jnr:jnr-x86asm:1.0.2" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: com.github.jnr:jnr-posix:3.0.50" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: com.github.jnr:jnr-constants:0.9.12" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: jline:jline:2.14.5" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: io.netty:netty-buffer:4.1.45.Final" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: io.netty:netty-codec:4.1.45.Final" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: io.netty:netty-common:4.1.45.Final" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: io.netty:netty-handler:4.1.45.Final" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: io.netty:netty-resolver:4.1.45.Final" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: io.netty:netty-transport:4.1.45.Final" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: org.apache.ant:ant:1.9.7" level="project" />
-    <orderEntry type="library" scope="RUNTIME" name="Maven: org.apache.ant:ant-launcher:1.9.7" level="project" />
+    <orderEntry type="library" name="Maven: org.jblas:jblas:1.2.4" level="project" />
   </component>
 </module>
\ No newline at end of file
diff --git a/pom.xml b/pom.xml
index 6c3d1d1..221d396 100644
--- a/pom.xml
+++ b/pom.xml
@@ -41,9 +41,9 @@
             <version>2.10.14</version>
         </dependency>
         <dependency>
-            <groupId>org.python</groupId>
-            <artifactId>jython-slim</artifactId>
-            <version>2.7.2</version>
+            <groupId>org.jblas</groupId>
+            <artifactId>jblas</artifactId>
+            <version>1.2.4</version>
         </dependency>
     </dependencies>
 
diff --git a/src/main/java/com/application/DB/DB.java b/src/main/java/com/application/DB/DB.java
index 6b14b56..53f8621 100644
--- a/src/main/java/com/application/DB/DB.java
+++ b/src/main/java/com/application/DB/DB.java
@@ -511,6 +511,7 @@ public class DB {
             formatedUtTidTorkPlussDays = addedDays.plusDays(ARJANG_NR_ADDED_DAYS).toString();
             formatedUtTidTorkPlussDays = formatedUtTidTorkPlussDays.split("T")[0];
 
+            /*
             if (locationID == ARJANG_LOCATION_ID) {
 
                 // Sqlstatement
@@ -543,8 +544,12 @@ public class DB {
                 if(!moistureMeasured.isEmpty()){
                     manMoistData.put(formatedUtTidTork,moistureMeasured);
                 }
+
+
             }
 
+             */
+
 
 
 
diff --git a/src/main/java/com/application/GUI/LineChartFunctionality.java b/src/main/java/com/application/GUI/LineChartFunctionality.java
index 0bc011d..b2d0807 100644
--- a/src/main/java/com/application/GUI/LineChartFunctionality.java
+++ b/src/main/java/com/application/GUI/LineChartFunctionality.java
@@ -9,7 +9,6 @@ import org.apache.commons.math3.distribution.TDistribution;
 import org.apache.commons.math3.exception.MathIllegalArgumentException;
 import org.apache.commons.math3.stat.descriptive.SummaryStatistics;
 import org.apache.commons.math3.stat.regression.SimpleRegression;
-import org.python.util.PythonInterpreter;
 
 import java.util.*;
 
@@ -117,7 +116,7 @@ public class LineChartFunctionality {
                 index++;
             }
             //allSeries.add(newSeries);
-            updateLineChart(newSeries);
+            //updateLineChart(newSeries);
             //lineChart.setOpacity(1);
         }
 
@@ -126,6 +125,8 @@ public class LineChartFunctionality {
         // Stores the data from the confidence interval in a new map
         Map<Integer, ArrayList<Double>> confidenceIntervalData = statistics(multiMap);
 
+        //getNonLinearRegression(confidenceIntervalData);
+
         // Checks the max size for the arraylists needed for the data array later
         int jMaxSize = 0;
         for (int i = 0; i < confidenceIntervalData.size(); i++) {
@@ -181,13 +182,12 @@ public class LineChartFunctionality {
 
 
         for (double[] datum : data) {
+            //System.out.println("");
             for (double v : datum) {
                 //System.out.println("Data: "+v);
             }
         }
 
-        PythonInterpreter pythonInterpreter = new PythonInterpreter();
-        //pythonInterpreter
 
 
 
@@ -196,9 +196,10 @@ public class LineChartFunctionality {
 
             // Connect the data to a series
             //System.out.println(simpleRegression.predict(i));
-            regressionSeries.getData().add(new XYChart.Data<String, Number>(String.valueOf(i), simpleRegression.predict(i)));
+            //regressionSeries.getData().add(new XYChart.Data<String, Number>(String.valueOf(i), simpleRegression.predict(i)));
+            regressionSeries.getData().add(new XYChart.Data<String, Number>(String.valueOf(i), getNonLinearRegression(confidenceIntervalData,simpleRegression.getIntercept(),simpleRegression.getSlope(),i)));
         }
-        //updateLineChart(regressionSeries);
+        updateLineChart(regressionSeries);
         //lineChart.setOpacity(1);
 
 
@@ -219,6 +220,36 @@ public class LineChartFunctionality {
 
         //simpleRegression.add
 
+
+
         return getLineChart();
     }
+
+
+    public static double getNonLinearRegression(Map<Integer, ArrayList<Double>> confidenceIntervalData, double slope, double intercept, double j) {
+        //return Math.exp(intercept+slope*i)/(1+Math.exp(intercept+slope*i));
+
+
+        double alpha = intercept/100;
+        double beta = alpha/(slope/100);
+        double maxYValue = 0.0;
+        double n = confidenceIntervalData.size();
+        for (Map.Entry<Integer, ArrayList<Double>> entry : confidenceIntervalData.entrySet()) {
+            for (int i = 0; i < entry.getValue().size(); i++) {
+                if(maxYValue < entry.getValue().get(i)){
+                    maxYValue = entry.getValue().get(i);
+                }
+            }
+        }
+        //System.out.println("maxYValue: " + maxYValue);
+        //System.out.println("j*n: "+j/n);
+
+        double p_t = ((beta*maxYValue)/(maxYValue+((beta-maxYValue)*Math.exp(-alpha*(j)))));
+
+        System.out.println("---------------------------");
+        System.out.println(p_t);
+
+        return p_t;
+
+    }
 }
diff --git a/target/classes/com/application/DB/DB.class b/target/classes/com/application/DB/DB.class
index dc3e7ef07457159c4cffad723fd086a463c4bef4..9d33fb5ed445c83a81f92756eb4ca1881531e601 100644
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diff --git a/target/classes/com/application/GUI/LineChartFunctionality.class b/target/classes/com/application/GUI/LineChartFunctionality.class
index 5a32389b113ac7d683fcb180754a030be228f01d..074d021597c64fa7a2a3e9ef449d69717f744a45 100644
GIT binary patch
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